Return to main results Retrieve Phyre Job Id

Job DescriptionP28904
Confidence91.09%DateThu Jan 5 11:45:17 GMT 2012
Rank236Aligned Residues70
% Identity14%Templated1g94a1
SCOP infoGlycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain
Resolution1.74

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   476...480.........490.........500.........510 .........520...... ...530.........540
Predicted Secondary structure 













..







.............









Query SS confidence 


































. .















. . . . . . . . . . . . .













Query Sequence  NYQDLLPNSPVLWCYRREWKGQTLLVIANLSREIQ. . PWQAGQMRGNWQLVMH. . . . . . . . . . . . . NYEEASPQPCAMNL
Query Conservation             
 
  
       


 
      ..   
            .............             
Alig confidence 




















...










..















.............













Template Conservation 








 
 


 

 

...





       
  
 



 







       


 



   
 
   
Template Sequence  AVTNWWDNTNNQISFGRGSSG. . . HMAINKEDSTLTATVQTDMASGQYCNVLKGELSADAKSCSGEVITVNSDGTINLNI
Template Known Secondary structure 


SSS
GGG...
SSS
B



S
S
TTT

B
TTSS
BSS

TTS

B
Template Predicted Secondary structure 






...




























Template SS confidence 















































































   357..360.........370....... ..380.........390.........400.........410.........420.........430...
 
   541.......
Predicted Secondary structure 


Query SS confidence 







Query Sequence  RPFEAVWW
Query Conservation   
     
Alig confidence 







Template Conservation   
  



Template Sequence  GAWDAMAI
Template Known Secondary structure 
TT
Template Predicted Secondary structure 



Template SS confidence 







   434.....440.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions