Job Description P28904 Confidence 52.83% Date Thu Jan 5 11:45:17 GMT 2012 Rank 433 Aligned Residues 88 % Identity 18% Template d1e4mm_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase Resolution 1.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.				.	.	.	.	.
Query SS confidence																																											.	.	.				.	.	.	.	.
Query Sequence		I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	Y	D	V	A	N	Y	T	A	I	D	P	T	.	.	.	Y	G	T	.	.	.	.	.	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L	D	M	V	F	N	H	T	S
Query Conservation																																											.	.	.				.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.				.	.	.	.	.																							.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Sequence		Q	K	D	I	D	V	L	D	E	L	N	A	T	G	Y	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	W	S	R	I	I	P	R	G	K	R	S	R	G	V	N	E	K	G	I	D	Y	Y	H	G	L	I	S	G	L	I	K	K	G	I	T	P	F	V	T	L	.	.	.	F	H	W
Template Known Secondary structure												T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	S	G	G	G																				T	T								.	.	.		S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.															.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	H	A	W	F	R	E	A	L	N	K	E	S	P	Y	R	Q	F	Y	I	W	R	D	G	E	P	E	T	P	P	N	N	W	R	S	K	F	G	G	S	A	W	R	W	H	A	E	S	E	Q	Y	Y	L	H	L	F	A	P	E	Q	A	D	L	N	W	E	N	P	A	V	R	A	E	L	K	K	V	C	E
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	P	Q	T	L	Q	D	E	Y	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	D	P	Q	I	I	D	D	F	K	D	Y	A	D
Template Known Secondary structure				B									G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.																																																						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		188	.	190		.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		F	W	A	.	D	R	G
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		L	C	F	E	E	F	G
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions