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Job DescriptionP28904
Confidence100.00%DateThu Jan 5 11:45:17 GMT 2012
Rank45Aligned Residues423
% Identity21%Templatec3zt5D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative glucanohydrolase pep1a; PDBTitle: glge isoform 1 from streptomyces coelicolor with maltose2 bound
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.. .
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Query Sequence  LPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQHLDYLHKLGVDAIWLTPFYVSPQVD. . . . . . . . . . . . . . . . . . . . N
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Template Sequence  ERERALYGAWYEFFPRSE. GTPHTPHGTFRTAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAI
Template Known Secondary structure 



GGGS.

SS

S

GGGTT




S
B

TT

BGGGBSS

TT



TTSB
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   205....210.........220.. .......230.........240.........250.........260.........270.........280...
 
   64.....70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  GYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRS
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Template Sequence  GSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLEIALDFALQCSP. DHPWVHK. . . . . . . HPEWFHHRPDGTIAHAENPPK
Template Known Secondary structure 
BTTB
TTS

GGG

TT



T.TS.......
GGGS


TTS



TT
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   284.....290.........300.........310.........320....... ..330.... .....340.........350.....
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  KFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFY
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Template Sequence  KYQDI. . . . . . . . . . . . . . . . . . YPIAFDADPDGLATETVRILRHWMDHGVRIFRVDNPHTKP. . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
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SS
TTT

S
GGGS
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   356...360 .........370.........380.........390.........400
 
   224.....230.........240.. .......250.........260.........270.........280.........290.........300..
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Query Sequence  TDGPRAHEFLHEMNRDVFT. PRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVALKT
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Template Sequence  . . . . . . VAFWERVIADINGTDPDVIFLAEAFTRPAMMATL. . . . . . . . . . . . . . . . . AQIGFQQSYTYFTWRNTKQELTE
Template Known Secondary structure  ......
TT



S
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S
SGGG

S
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   401........410.........420.........430.... .....440.........450.......
 
   303......310.........320.........330.........340.........350.........360.........370.........380..
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Query Sequence  LFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDV
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Template Sequence  YLTELSGEAASYMRPNFFANTPDILHAYLQHGG. . . . . RPAFEVRAVLAATLSPTWGIYSGYELCENTPLREGSEEYLDS
Template Known Secondary structure  TGGGGT

S
BTTB


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STTTTTT


BSSTT

SBTT
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   458.460.........470.........480.........490 .........500.........510.........520.........530..
 
   383......390.........400.........410.........420.........430.........440.........450.........460..
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Query Sequence  ESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALADDSSVFYTYQKL
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Template Sequence  E. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KYQLKPRDWTRAAREGTTIAPLVTRL
Template Known Secondary structure  T.....................................................TSS




T


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   533 ......540.........550.........
 
   463......470...... ...480.........490.........500...... ...510..... ....520.........530
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Query Sequence  IALRKQEAILTWGN. YQDLLPNSPVLWCYRREWKGQTLLVIANLS. . . REIQPWQAG. . . . . . . . QMRGNWQLVMHNYEE
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Template Sequence  NTIRRENPALRQLRDLHFHPTDKEEVIAYSKRQGSNTVLVVVNLDPRHTQEATVSLDMPQLGLDWHESVPVRDELTGETY
Template Known Secondary structure 
GGGG
SS


BS
TTTT

SSS


TGGGT

TT
TTTT
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   560.........570.........580.........590.........600.........610.........620.........630.........
 
   531........540.... .....550.
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Query Sequence  ASPQPCAMNLRPFE. . AVWWLQK
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Template Conservation    
    
 
 
      
    
Template Sequence  HWGRANYVRLEPGRTPAHVCTVL
Template Known Secondary structure  S
TTT
S
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   640.........650.........660..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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