Return to main results Retrieve Phyre Job Id

Job DescriptionP28904
Confidence72.87%DateThu Jan 5 11:45:17 GMT 2012
Rank342Aligned Residues88
% Identity19%Templatec3u57A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:raucaffricine-o-beta-d-glucosidase; PDBTitle: structures of alkaloid biosynthetic glucosidases decode substrate2 specificity
Resolution2.43 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70...... ... 80.........90.........100.......
Predicted Secondary structure 



























...


.....






Query SS confidence 








































. . .


. . . . .



























Query Sequence  IQHLDYLHKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPT. . . YGT. . . . . LDDFDELVTQAKSRGIRIILDMVFNHTS
Query Conservation     




 


  
 
 

        

   
   

  ... 

.....  


 

   
  

 



 
 

  
Alig confidence 
















..............









...


.....





















...


Template Conservation   


 
   

  



..............

 



 
 
   
  
  

  
   

 
   

 




... 

Template Sequence  KEDVNILKNLGLDAYRF. . . . . . . . . . . . . . SISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTL. . . FHW
Template Known Secondary structure  T
S..............

STTSSGGG


TT
...SS
Template Predicted Secondary structure 



..............

















...

Template SS confidence 















































































   7980.........90..... ....100.........110.........120.........130........ .140.
 
   108.110.........120.........130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  TQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCE
Query Conservation                   
                                             

   
 
         
Alig confidence 











.....................................................














Template Conservation 


  
    

.....................................................
     
  
  

 
Template Sequence  DVPQALEDEYGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FLSPRIVDDFCEYAE
Template Known Secondary structure 

B
G.....................................................GGST
Template Predicted Secondary structure 




.....................................................


Template SS confidence 















































































   142.......150... ......160........
 
   188.190 ...
Predicted Secondary structure  .

Query SS confidence 


.


Query Sequence  FWA. DRG
Query Conservation   
 .
 
Alig confidence 


.


Template Conservation   
   

Template Sequence  LCFWEFG
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 






   169170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions