Job Description P28904 Confidence 96.44% Date Thu Jan 5 11:45:17 GMT 2012 Rank 188 Aligned Residues 130 % Identity 18% Template c3rpmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-n-acetyl-hexosaminidase; PDBTitle: crystal structure of the first gh20 domain of a novel beta-n-acetyl-2 hexosaminidase strh from streptococcus pneumoniae r6 Resolution 2.10 Å

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		13	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	Q	I	Y	P	K	S	.	F	Q	D	T	T	G	S	G	T	G	D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	Y	D	V	A	N	Y	T	A	I	D	P	T	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.			.	.	.	.	.	.	.	.																							.	.	.						.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																							.	.	.						.
Template Sequence		I	V	S	I	D	A	G	R	K	Y	F	.	.	.	.	.	.	.	.	S	P	E	Q	L	K	E	I	I	D	K	A	K	H	Y	G	Y	T	D	L	H	L	.	.	.	L	V	G	N	D	.	G	L	R	F	X	L	D	D	X	S	I	T	A	N	G	K	T	Y	A	S	D	D	V	K	R	A	I	E	K	G
Template Known Secondary structure							T	T	T	S			.	.	.	.	.	.	.	.																T							.	.	.				S	S	.	S	B					S							T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																							.	.	.						.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
															79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	.	.	L	D	M	V	F	N	H	T	S	T	Q	H	A	W	F	R	E	A	L	N	K	E	S	P	Y	R	Q	F	Y	I	W	R	D	G	E	P	E	T	P	P	N	N	W	R	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.				.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	D	Y	Y	N	D	P	N	G	N	H	L	T	E	S	Q	X	T	D	L	I	N	Y	A	K	D	K	G	I	G	L	I	P	T	V	N	S	.	P	G	H	X	D	A	I	L	N	A	X	K	E	L	G	I	Q	N	P	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T		S																	T	T										.	S	S	S											T	T		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	G	G	S	A	W	R	W	H	A	E	S	E	Q	Y	Y	L	H	L	F	A	P	E	Q	A	D	L	N	W	E	N	P	A	V	R	A	E	L	K	K	V	C	E	F	W	A	D	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	F	G	K	K	S	A	R	T	V	D	L	D	N	E	Q	A	V	A	F	T	K	A	L	I	D	K	Y	A	A	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions