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Job DescriptionP28904
Confidence94.57%DateThu Jan 5 11:45:17 GMT 2012
Rank214Aligned Residues61
% Identity31%Templatec3pohA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-n-acetylglucosaminidase f1; PDBTitle: crystal structure of an endo-beta-n-acetylglucosaminidase (bt_3987)2 from bacteroides thetaiotaomicron vpi-5482 at 1.55 a resolution
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  LDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQY
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Template Sequence  LDNNETLLQPLRRRGVKVLLGLLGNHDITGLA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT


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   252.......260.........270.........280...
 
   160.........170.........180.........190.........200
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Query Sequence  YLHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLD
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Template Sequence  . . . . . . . . . . . . QLSEQGAKDFAREVAQYCKAYNLDGVNYD
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B
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   284.....290.........300.........310..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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