Job Description P28904 Confidence 56.78% Date Thu Jan 5 11:45:17 GMT 2012 Rank 416 Aligned Residues 81 % Identity 16% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.														.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	V	I	Y	Q	I	Y	P	K	S	F	Q	D	T	T	G	S	G	T	G	D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	V	A	N	Y	T	A	I	D	P	T
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																					.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		P	R	L	T	L	E	I	G	E	E	Q	L	P	.	.	.	.	.	.	.	.	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	.	.	.	.	L	Q	R	F	G	G	R	F	S	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	D	I	D	Q	E
Template Known Secondary structure		T	T							S	S	S			.	.	.	.	.	.	.	.																T					.	.	.	.					T	T	T	G	G	G	G	G	G					T		S						G	G	G	G	T	T	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.									.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.					.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L	D	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I	A	E	R	V
Template Known Secondary structure		T																T	T
Template Predicted Secondary structure
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions