Job Description P28904 Confidence 50.17% Date Thu Jan 5 11:45:17 GMT 2012 Rank 456 Aligned Residues 79 % Identity 11% Template c3mebB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	P	K	S	F	Q	D	T	T	G	S	G	T	G	D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	Y	D	V	A	N	Y	T	A	I	D	P	T	Y	G	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I
Query Conservation
Alig confidence																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	E	Y	T	Y	L	R	K	D	G	E	L	E	I	D	F	S	N	T	K	K	D	I	Q	.	.	S	A	P	E	K	S	I	F	L	F	H	A	C	A	H	N	P	S	G	I	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	A	Q	W	K	E	L	L	P	I	M	K	E	K	K	H
Template Known Secondary structure								B		T	T	S		S	S	B											.	.		S		T	T							S	S	S		T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.																T
Template Predicted Secondary structure																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	L	D	M	V	F	N	H	T	S	T	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	F	F	D	S	A	Y	Q	G	F	A	T	G	S
Template Known Secondary structure								S		T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions