Job Description P28904 Confidence 82.45% Date Thu Jan 5 11:45:17 GMT 2012 Rank 296 Aligned Residues 93 % Identity 20% Template c3gdbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein spr0440; PDBTitle: crystal structure of spr0440 glycoside hydrolase domain,2 endo-d from streptococcus pneumoniae r6 Resolution 1.87 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																							.	.											.	.
Query SS confidence																							.	.											.	.
Query Sequence		V	T	Q	A	K	S	R	G	I	R	I	I	L	D	M	V	F	N	H	T	S	.	.	T	Q	H	A	W	F	R	E	A	L	.	.	N	K	E	S	P	Y	R	Q	F	Y	I	W	R	D	G	E	P	E	T	P	P	N	N	W	R	S	K	F	G	G	S	A	W	R	W	H	A	E	S	E	Q	Y	Y	L	H
Query Conservation																							.	.											.	.
Alig confidence																							.	.											.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	A	G	H	R	N	G	V	P	V	Y	G	T	L	F	F	N	W	S	N	S	I	A	D	Q	E	R	F	A	E	A	L	K	Q	D	A	D	G	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T																									T				T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	P	E	Q	A	D	L	N	W	E	N	P	A	V	R	A	E	L	K	K	V	C	E	F	W	A	D	R	G	V	D	G	L	R	L	D	V	V	N	L	I	S	K	D	P	R	F	P	E	D	L	D	G	D	G	R	R	F	Y	T	D	G	P	R	A	H	E	F	L	H	E	M	N	R	D	V	F	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	A	R	K	L	V	D	M	A	K	Y	.	.	.	Y	G	Y	D	G	Y	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	E	T	T	G	D	L	V	K	P	L	G	E	K	M	R	Q	F	M	L	Y	S	K	E	Y	A	A	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.		T							.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	T	T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																315	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.															.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
			243	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	R	G	L	M	T	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	N	H	P	I	K	Y	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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