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Job DescriptionP28904
Confidence98.78%DateThu Jan 5 11:45:17 GMT 2012
Rank114Aligned Residues316
% Identity16%Templatec2yfnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask; PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  DLRGVIQHLDYLHKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQH
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Template Sequence  TGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGG. . SLAELITRVHEQGMKFGIWIEPEMINEDS
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TTT


SSSBTT
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SB
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TT

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   344.....350.........360.........370.........380.........390.. .......400.........410.........420.
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  AWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWA
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Template Sequence  DLYRA. . . . . . . HPDWAIRIQGKKPVRSR. . . . . . . . . . . . . . . . . . . . . . . . . . . NQLLLDFSRKEVRDCVFDQICVVL
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GGGB


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BT...........................TBB
TT
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   422.... ...430.........440... ......450.........460.......
 
   191........200.........210.........220.........230.........240.........250.........260.........
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Query Sequence  . DRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGS
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Template Sequence  DQGKIDYVKWDM. . . . . . . . . . . NRSMADVYAGNLSYDYVLGVYDFMERLCSRYPDLLLEGCSGGG. . . . . . . . . . . . . .
Template Known Secondary structure  TTS




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   468.470......... 480.........490.........500.........510.........520..
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  ELSMTFNFHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAM
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Template Sequence  . . . . . . GRFDAGMLYYSPQIWCSDNTDAINRTRIQYGTSFFYPVSAMGAHVSAVPNHQTGRVTS. . . . . . . . . . . . . FHT
Template Known Secondary structure  ......TT
STT
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TTTS
GGG


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   523......530.........540.........550.........560.........570.........580 ...
 
   350.........360.........370.........380.........390.........400.........410.........420.........
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Query Sequence  VLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTA
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Template Sequence  RGVTAMAGTFGYELNPALLSDE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT

S
GGGS
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   430.........440.........450.........460......... 470.........480...... ...490.........500.....
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Query Sequence  GEPWIGLGDNYQQINVEAALADDSSVFYTYQKLIALRKQE. AILTWGNYQDLLPNSPV. . . LWCYRREWKGQTLLVIANL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . EKQQIREQIKTYKKYETLINEGTYWRLSDPFTDEIAAWMSVSEEQDHALVSVVRL
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S
TTTSS
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   606...610.........620.........630.........640.........650.........660
 
   506...
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Query Sequence  SREI
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Template Sequence  MAEA
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S
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   661...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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