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Job DescriptionP28904
Confidence97.53%DateThu Jan 5 11:45:17 GMT 2012
Rank138Aligned Residues133
% Identity18%Templatec2xvgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha xylosidase; PDBTitle: crystal structure of alpha-xylosidase (gh31) from2 cellvibrio japonicus
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40...... ...50...... ...60.........70.........80.........90.........100......
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Query Sequence  DLRGVIQHLDYLHKLG. . VDAIWLTPFY. . VSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHT
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Template Sequence  SSDEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWGSHDFDKQFF. . . . . . . . . . PDPKALVDKVHAMNAQIMISVWP. KF
Template Known Secondary structure  STT




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   446...450.........460.........470.........480......... 490.........500.........510.. ..
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  STQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVC
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Template Sequence  YPTTDNYKELNAKGFMF. . . . . . . . . . . . . . . . . . . . . . . . . . . NRNLDEKNLDWIGKGYLNAFYDPFSPEATAIFWKQI
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TTSTT
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SSTT

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   515....520.........530. ........540.........550.........560.......
 
   187..190 .........200.
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Query Sequence  EFWA. DRGVDGLRLDV
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Template Sequence  RDKINVHGFDAWWLDA
Template Known Secondary structure  TGGGT



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   568.570.........580...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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