Job Description P28904 Confidence 89.71% Date Thu Jan 5 11:45:17 GMT 2012 Rank 245 Aligned Residues 71 % Identity 20% Template c2xfyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-amylase; PDBTitle: crystal structure of barley beta-amylase complexed with2 alpha-cyclodextrin Resolution 1.21 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		T	T	G	S	G	T	G	D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	Y	.	.	.	.	D	V	A	N	Y	T	A	I	D	P	T	Y	G	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L
Query Conservation																																												.	.	.	.
Alig confidence																															.	.	.	.	.	.	.							.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		S	V	N	N	R	F	E	K	G	D	E	L	R	A	Q	L	R	K	L	V	E	A	G	V	D	G	V	M	V	.	.	.	.	.	.	.	D	V	W	W	G	L	V	E	G	K	G	P	K	A	Y	.	.	.	.	.	.	.	.	D	W	S	A	Y	K	Q	L	F	E	L	V	Q	K	A	G	L	K	L	Q	A
Template Known Secondary structure			T	T	S																		T	T							.	.	.	.	.	.	.								T		S	S	T	T			.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	V	F	N	H	T	S	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	S	F	H	Q	C	G	G	N
Template Known Secondary structure						S		B			S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions