Job Description P28904 Confidence 96.93% Date Thu Jan 5 11:45:17 GMT 2012 Rank 158 Aligned Residues 155 % Identity 11% Template c2x2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:alpha-1,4-glucan lyase isozyme 1; PDBTitle: crystal structure of the gracilariopsis lemaneiformis alpha-2 1,4-glucan lyase with acarbose Resolution 2.60 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		V	I	Q	H	L	D	Y	L	H	K	L	G	V	.	.	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	Y	D	V	A	N	Y	T	A	I	D	P	T	Y	G	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L	D	M	V	F	N	H	T	S	T	Q	H	A	W
Query Conservation															.	.
Alig confidence															.	.																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	E	E	I	V	E	G	Y	Q	N	N	N	F	P	F	E	G	L	A	V	D	V	D	M	Q	D	N	L	R	V	F	T	T	K	G	E	F	W	T	A	N	R	V	G	T	G	G	D	P	N	N	R	S	V	F	E	W	A	H	D	K	G	L	V	C	Q	T	N	I	T	C	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T										G	G	G	S	B	T	T	B	T	T				G	G	G	B	T	T	S	S				S			T	T	S		B							T	T	T									S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		F	R	E	A	L	N	K	E	S	P	Y	R	Q	F	Y	I	W	R	D	G	E	P	E	T	P	P	N	N	W	R	S	K	F	G	G	S	A	W	R	W	H	A	E	S	E	Q	Y	Y	L	H	L	F	A	P	E	.	.	.	.	.	.	Q	A	D	L	N	W	E	N	P	A	V	R	A	E	L	K	K	V	C
Query Conservation																																																									.	.	.	.	.	.
Alig confidence		.	.	.																																																					.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	L	R	N	D	N	E	G	Q	D	Y	E	V	N	Q	T	L	R	E	R	Q	L	Y	T	K	N	D	S	L	T	G	T	D	F	G	M	T	D	D	G	P	S	D	A	Y	I	G	H	L	D	Y	G	G	G	V	E	C	D	A	L	F	P	D	W	G	R	P	D	V	A	E	W	W	G	N	N	Y
Template Known Secondary structure		.	.	.							T	T												T	T		B					B	T	T								S	S	S		T	T	S								S	T	T								B		T	T	S	T	T									T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	W	A	D	R	G	V	D	G	L	R	L	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	L	F	S	I	G	L	D	F	V	W	Q	D	M
Template Known Secondary structure						T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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