Job Description P28904 Confidence 65.24% Date Thu Jan 5 11:45:17 GMT 2012 Rank 370 Aligned Residues 80 % Identity 14% Template c2w27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ykui protein; PDBTitle: crystal structure of the bacillus subtilis ykui protein,2 with an eal domain, in complex with substrate c-di-gmp and3 calcium Resolution 2.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.
Predicted Secondary structure																																																							.	.	.	.	.																			.	.	.
Query SS confidence																																																							.	.	.	.	.																			.	.	.
Query Sequence		V	I	Y	Q	I	Y	P	K	S	F	Q	D	T	T	G	S	G	T	G	D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	.	.	.	.	.	Y	D	V	A	N	Y	T	A	I	D	P	T	Y	G	T	L	D	D	.	.	.	F
Query Conservation																																																							.	.	.	.	.																			.	.	.
Alig confidence													.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		F	V	L	E	I	T	E	H	N	F	E	.	.	.	.	.	.	.	G	D	I	E	Q	L	Y	H	M	L	A	Y	Y	R	T	Y	G	I	K	I	A	.	.	.	.	V	D	N	I	G	K	E	S	S	N	L	D	R	I	A	L	L	S	P	D	L	L	K	I	D	L	Q	A	L	S	P	S	Y	E	H	V	L
Template Known Secondary structure								G	G	G			.	.	.	.	.	.	.	S														T	T	T					.	.	.	.					T	T	T	B												S							T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L	D	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	I	S	L	L	A	R	K	I	G	A	A	L	L	Y	E	D	I
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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