Return to main results Retrieve Phyre Job Id

Job DescriptionP28904
Confidence70.83%DateThu Jan 5 11:45:17 GMT 2012
Rank350Aligned Residues60
% Identity20%Templatec2dskA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:chitinase; PDBTitle: crystal structure of catalytic domain of hyperthermophilic chitinase2 from pyrococcus furiosus
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  TLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQ
Query Conservation 
  


 

   
  

 



 
 

                   
                                 
Alig confidence 






















.........................................................
Template Conservation          
  
   
 

 


.........................................................
Template Sequence  PLEKFVDEVRELREIGGEVIIAF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
GGGGTTT
.........................................................
Template Predicted Secondary structure 




.........................................................
Template SS confidence 















































































   465....470.........480.......
 
   159160.........170.........180.........190.........200
Predicted Secondary structure 


















Query SS confidence 









































Query Sequence  YYLHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLD
Query Conservation              

   
 
          
 
 





 
Alig confidence  .....




































Template Conservation  .....

               
       
  

 





Template Sequence  . . . . . GGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFD
Template Known Secondary structure  .....SS



SST
S
Template Predicted Secondary structure  .....

















Template SS confidence 









































   488.490.........500.........510.........520....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions