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Job DescriptionP28904
Confidence100.00%DateThu Jan 5 11:45:17 GMT 2012
Rank74Aligned Residues421
% Identity21%Templatec1wpcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltohexaosidase; PDBTitle: crystal structure of maltohexaose-producing amylase complexed with2 pseudo-maltononaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IYPKSFQDTTGSGTGDLRGVIQHLDYLHKLGVDAIWLTPFYVSPQV. DNGYDVANY. . . . . . . . . TAIDPTYGTLDDFDE
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Template Sequence  TMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQA
Template Known Secondary structure 



TT

SSS
T




SSSTT

S
STT
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BTTBSS
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   86...90.........100....... ..110....... ..120.........130..
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Query Sequence  LVTQAKSRGIRIILDMVFNHTS. . TQHAWFREAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKESPYRQFYIWRDG
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Template Sequence  AVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGVDW
Template Known Secondary structure  TT


S
S
STT
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B

TTTTTSS



B
GGGS
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   133......140.........150.........160.........170.........180.........190 .........200.........210.
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Query Sequence  EPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWA. DRGVDGLRLDVVNLISKDPRF
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Template Sequence  DQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKY. . . .
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TTT

SS

STT



SS


TTS




SS
TT
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STTGGGS
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   168.170.........180.........190.........200.........210.........220.........230.........240...
 
   212.......220.........230.........240.. .......250.........260.........270.........280.........
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Query Sequence  PEDLDGDGRRFYTDGPRAHEFLHEMNRDVFT. . PRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEK
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Template Sequence  . . . . . . . . . . . . . . . . . . . SFTRDWINHVRSATGKNMFAVAEFWKNDLGAIENY. LQKTNWNHSVFDVPLHYNLYNASKS
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S
.TTT
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   244.....250.........260.........270........ .280.........290.........300...
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  WTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMT
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Template Sequence  GGNYDMRN. . . . . . IFNGTVVQRHPSHAVTFVDNHDSQPEEALESFVEEWFKPL. . AYALTLTREQGYPSVFYGDYYGIP
Template Known Secondary structure  TT
S
GGG......TTTT

GGG
S

TTTSTTSTT




TTT..SSSSS
BG
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   304.....310. ........320.........330.........340.........350. ........360.........370.....
 
   370.........380.........390.........400.........410.........420.........430.........440.........
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Query Sequence  NPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAAL
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Template Sequence  THGVPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGTB

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   376...380.
 
   450.........460.........470.........480.........490... ......500.........510........ .520..
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Query Sequence  ADDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRRE. . . . . WKGQTLLVIANLSREIQPWQAGQMR. . GNWQ
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Template Sequence  . . . . . MRSKIDPILEARQKYAY. . . GKQNDYLDHH. NIIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWS
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T

...S


SS.S


TTSTT

SSS


GGGTT
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   382.......390........ .400........ .410.........420.........430.........440.........450..
 
   523......530. ........540.........550.
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Query Sequence  LVMHNYEEA. . . . SPQPCAMNLRPFEAVWWLQK
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Template Conservation 
        
     
     
   
  
 
  
Template Sequence  DITGNRTGTVTINADGWGNFSVNGGSVSIWVNK
Template Known Secondary structure  TTSSS
S

TTS
TT

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   453......460.........470.........480.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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