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Job DescriptionP0A9P0
Confidence99.71%DateThu Jan 5 11:10:52 GMT 2012
Rank138Aligned Residues205
% Identity22%Templated1chua2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  TEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTD
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Template Sequence  PEHSCDVLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEF. . . . . . . . . . . . . . . . . DETDSIDSHVEDTLIAGAGICD
Template Known Secondary structure 
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STTTS.

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STTT


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   5....10.........20.........30. ........40.... .....50.........60......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  IDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRI
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Template Sequence  RHAVEFVASNARSCVQWLIDQGVLTTLVS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




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   80.........90.........100........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  WDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTAVE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KALNHPNIRVLERTNAVDLI
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TT
S
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   147..150.........160......
 
   243..... .250.........260.........270.. .......280.........290.........300
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Query Sequence  AKEDGI. . . . . . . . . YVTMEGKKAPAEPQRYDAVLVAIG. . . . . . . . . . . . . RVPNGKNLDAGKAGVEVDDRGFIRVDKQ
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Template Sequence  VSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANCGGVMVDDH
Template Known Secondary structure  GGGTT

SS
BTTTT
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GGGSSS
S
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TT
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   301........310...... ...320.........330......
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Query Sequence  LRTNVPHIFAIGDIVG. . . . . . . . . QPMLAHKGVHEGHVAAEVIA
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Template Sequence  GRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDIT
Template Known Secondary structure 
B
SSBT
GGG
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   363......370.........380.........390.........400.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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