Job Description P0A9P0 Confidence 99.30% Date Thu Jan 5 11:10:52 GMT 2012 Rank 194 Aligned Residues 244 % Identity 16% Template c3nksA_ PDB info PDB header:oxidoreductase/oxidoreductase inhibitor Chain: A: PDB Molecule:protoporphyrinogen oxidase; PDBTitle: structure of human protoporphyrinogen ix oxidase Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	.	.	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T	D	I	D
Query Conservation																									.	.
Alig confidence																									.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	V	V	V	L	G	G	G	I	S	G	L	A	A	S	Y	H	L	S	R	A	P	C	P	P	K	V	V	L	V	E	S	S	E	R	L	G	G	W	I	R	S	V	R	G	P	N	G	A	I	F	E	L	G	P	R	G	I	R	P	A	G	A	L	G	A	R	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B												T	S	S	S									S	S	S	S	S	B	T	T							T	T	S					S	S				B										.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R	I	W	D
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	T	L	L	L	V	S	E	L	G	L	D	S	E	V	L	P	V	R	G	D	H	P	A	A	Q	N	R	F	L	Y	V	G	G	A	L	H	A	L	P	T	G	L	R	G	P	S	P	P	F	S	K	P	L	F	W	A	G	L	R	E	L	T	K	P	R	G	K	E	P	D	E	T	V	H	S
Template Known Secondary structure		.	.	.	.	.								T	T		G	G	G						T	T	S											T	T								S	S					T	T	S		S		S	S					T	T	T	T	S					S	S			B
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																															.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	Q	R	R	L	G	P	E	V	A	S	L	A	M	D	S	L	C	R	G	V	F	A	G	N	S	R	E	L	S	I	R	S	C	F	P	S	L	F	Q	A	E	Q	T	H	R	S	I	L	L	G	L	L	L	G	Q	P	D	S	A	L	I	R	Q	A	L	A	E	R	W	S	Q	W	S	L	R	G	G	L
Template Known Secondary structure															T										S	S		T	T	T	B	B																S																						T	T		S					T	T		T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V	E	A	K	E	D	G	I	Y	V	T	M	E	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		E	M	L	P	Q	A	L	E	T	H	L	T	S	R	G	V	S	V	L	R	G	Q	P	V	C	G	L	S	L	Q	A	E	G	R	W	K	V	S	L	.	.	.	.	R	D	S	S	L	E	A	D	H	V	I	S	A	I
Template Known Secondary structure		T													T	T						S										G	G	G							.	.	.	.	S	S						S						S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions