Job Description P0A9P0 Confidence 99.97% Date Thu Jan 5 11:10:52 GMT 2012 Rank 60 Aligned Residues 290 % Identity 16% Template c3kpgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfide-quinone reductase, putative; PDBTitle: crystal structure of sulfide:quinone oxidoreductase from2 acidithiobacillus ferrooxidans in complex with decylubiquinone Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	.	.	.	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T
Query Conservation																										.	.	.
Alig confidence				.																						.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	.	H	V	V	I	L	G	A	G	T	G	G	M	P	A	A	Y	E	M	K	E	A	L	G	S	G	H	E	V	T	L	I	S	A	N	D	Y	F	Q	F	V	P	S	N	P	W	V	G	V	G	W	K	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.								S	T	T														T	T	S							S	S	S					G	G	G							T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	I	A	F	P	I	R	H	Y	V	E	R	K	G	I	H	F	I	A	Q	S	A	E	Q	I	D	A	E	A	Q	N	I	T	L	A	D	G	.	N	T	V	H	Y	D	Y	L	M	I	A	T	G	P	K	L	A	F	E	N	V	P	G	S	D	P	H	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T													T	T	T	T					T	T	S	.						S												G	G	G	S	T	T		S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
															56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		162	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																					.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	W	D	S	T	.	.	.	.	.	.	.	.	.	.	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	V	V	E	M	F	D	Q	V	I
Query Conservation							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	V	Q	S	I	C	T	V	D	H	A	E	R	A	F	A	E	Y	Q	A	L	L	R	E	P	G	P	I	V	I	G	A	M	A	G	A	S	C	F	G	P	A	Y	E	Y	A	M	I	V	A	S	D	L	K	K	R	G	M	R	D	K	I	P	S	F	T	F	I	T	S	E	P	Y	I	G	H	L	G	I
Template Known Secondary structure		S	S					S	S																	S										T	T																						T		G	G	G		S							S	S	S	S	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V	E	A	K	E	D	G	I	Y	V	T	M	E	G	K	K	.	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D
Query Conservation																																															.
Alig confidence																																															.																					.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		Q	G	V	G	D	S	K	G	I	L	T	K	G	L	K	E	E	G	I	E	A	Y	T	N	C	K	V	T	K	V	E	D	N	K	M	Y	V	T	Q	V	D	E	K	G	E	T	I	K	E	M	V	L	P	V	K	F	G	M	M	I	P	A	F	K	G	V	.	.	.	P	A	V	A	G	V	E	G	L	C	N
Template Known Secondary structure		T			T	T												T	T						S								T	T									T	T	S											S												.	.	.					T	S	T	T	T	B
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.													.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	G	F	I	R	V	D	K	Q	L	R	.	T	N	V	P	H	I	F	A	I	G	D	I	V	G	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I	A
Query Conservation														.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	G	F	V	L	V	D	E	H	Q	R	S	K	K	Y	A	N	I	F	A	A	G	I	A	I	A	I	P	P	V	E	T	T	P	V	P	T	G	A	P	K	T	G	Y	M	I	E	S	M	V	S	A	A	V	H	N	I	K
Template Known Secondary structure		T	T	S		B		B		T	T	S	B	B	S	S		T	T					G	G	G	B					S				S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions