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Job DescriptionP0A9P0
Confidence99.96%DateThu Jan 5 11:10:52 GMT 2012
Rank74Aligned Residues281
% Identity19%Templatec3k30B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  STEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKT
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Template Sequence  AKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESP
Template Known Secondary structure 

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ST

SSSSS
TTSTT
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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MTGDDIVEFGFEHVITATGATWRTDGVARFHTTA
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   467..470.........480.........490.........500
 
   162... ....170.........180.........190.........200.........210....... ..220........
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Query Sequence  IWDS. . . . . . . . . . . TDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKD. . IVKVFTKRISK
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Template Sequence  LPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIEN
Template Known Secondary structure 

B
TTS

T


SSS
S
SSTT
SSSSTTGGGGTTT
T
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   501........510.........520.........530.........540.........550.........560.........570.........580
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  KFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHI
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Template Sequence  GVARVTDHAVVAVGAGG. . . VTVRDTYASIERELECDAVVMVTARLPREELYLD. . . . . . . . . . . . . LVARRDAGEIASV
Template Known Secondary structure  T
STT...TTT


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   581........590....... ..600.........610.........620.........630. ........640....
 
   309310.........320.........330.........340.....
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Query Sequence  FAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPK
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Template Sequence  RGIGDAWA. PGTIAAAVWSGRRAAEEFDAVLPSNDEV
Template Known Secondary structure 
GGGTS.


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   645....650.. .......660.........670.........680
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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