Job Description P0A9P0 Confidence 100.00% Date Thu Jan 5 11:10:52 GMT 2012 Rank 13 Aligned Residues 464 % Identity 20% Template c3ic9D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: the structure of dihydrolipoamide dehydrogenase from colwellia2 psychrerythraea 34h. Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T	D	I	D
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		I	N	V	D	V	A	I	I	G	T	G	T	A	G	X	G	A	Y	R	A	A	K	K	H	T	D	K	V	V	L	I	E	G	G	A	.	Y	G	T	T	C	A	R	V	G	C	X	P	S	K	L	L	I	A	A	A	D	A	S	Y	H	A	S	Q	T	D	L	F	G	I	Q	V	D	R	I	S	V	N	G	K
Template Known Secondary structure												S												T	T		S							S	S		.	S	S							S																		T		G	G	G	G	T				S
Template Predicted Secondary structure																																					.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R	I	W	D
Query Conservation
Alig confidence																																														.	.
Template Conservation																																														.	.
Template Sequence		A	V	X	K	R	I	Q	T	E	R	D	R	F	V	G	F	V	V	E	S	V	E	S	F	D	E	Q	D	K	I	R	G	F	A	K	F	L	D	E	H	T	L	Q	V	.	.	D	D	H	S	Q	V	I	A	K	R	I	V	I	A	T	G	S	R	P	N	Y	P	E	F	L	A	A	A	G	S	R	L	L	T
Template Known Secondary structure																									S		G	G	G				S							T	T					.	.	T	T	T																								T	T	G	G	G
Template Predicted Secondary structure																																														.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	.	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V	E	A
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		N	D	N	L	F	E	L	N	D	L	P	K	S	V	A	V	F	G	P	G	V	I	G	L	E	L	G	Q	A	L	S	R	L	G	V	I	V	K	V	F	G	R	S	G	S	V	A	N	L	Q	D	E	E	X	K	R	Y	A	E	K	T	F	N	E	E	F	Y	F	D	A	K	A	R	V	I	S	T	I	E	K
Template Known Secondary structure						T	T		S	S			S								S													T	T								S	S	S			T	T			S													T	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		K	E	D	G	I	Y	V	T	M	E	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	Q	.	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V	G	Q	P	M	L	A	H
Query Conservation																																																											.
Alig confidence												.																																															.
Template Conservation												.
Template Sequence		E	D	A	V	E	V	I	Y	F	D	.	K	S	G	Q	K	T	T	E	S	F	Q	Y	V	L	A	A	T	G	R	K	A	N	V	D	K	L	G	L	E	N	T	S	I	E	L	D	K	K	N	S	P	L	F	D	E	L	T	L	Q	T	S	V	D	H	I	F	V	A	G	D	A	N	N	T	L	T	L	L	H
Template Known Secondary structure		S	S	S								.	T	T	S								S						S					T	T	S	S	S		G	G	G	S				B		T	T	S		B		B		T	T	T		B	B	S	S	T	T					G	G	G	G	T	S	S		S
Template Predicted Secondary structure												.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																						.	.																													.	.	.	.	.
Query SS confidence																						.	.																													.	.	.	.	.
Query Sequence		K	G	V	H	E	G	H	V	A	A	E	V	I	A	G	K	K	H	Y	F	.	.	D	P	K	V	I	P	S	I	A	Y	T	E	P	E	V	A	W	V	G	L	T	E	K	E	A	K	E	K	.	.	.	.	.	G	I	S	Y	E	T	A	T	F	P	W	A	A	S	G	R	A	I	A	S	D	C	A	D	G
Query Conservation																						.	.																													.	.	.	.	.
Alig confidence																						.	.																													.	.	.	.	.
Template Conservation
Template Sequence		E	A	A	D	D	G	K	V	A	G	T	N	A	G	A	Y	P	V	I	A	Q	G	Q	R	R	A	P	L	S	V	V	F	T	E	P	Q	V	A	S	V	G	L	S	L	R	Q	I	E	D	L	Y	A	D	Q	D	A	A	N	Y	V	V	G	Q	V	S	F	E	G	Q	G	R	S	R	V	X	G	K	N	K	G
Template Known Secondary structure																	T	T	S															S	S	S							S											T	S	S	S										G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	K	L	I	F	D	K	E	S	H	R	V	I	G	G	A	I	V	G	T	N	G	G	E	L	L	G	E	I	G	L	A	I	E	M	G	C	D	A	E	D	I	A	L	T	I	H	A	H	P	T	L	H	E	S	V	G	L	A	A	E	V	F	E	G	S	I	T	D	L	P	N	P	K	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	N	V	Y	A	D	R	T	S	G	E	F	L	G	A	E	X	F	G	P	A	A	E	H	I	G	H	L	L	A	W	A	R	Q	Q	Q	X	T	V	Q	A	X	L	T	X	P	F	Y	H	P	V	I	E	E	G	L	R	T	A	L	R	D	A	Q	Q	K	L	A	I	E	K	H	D	X	N	E
Template Known Secondary structure									T	T	T		B									T	T														T	T		B						T	S				T	T	S	T														T	S	S	S		G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.