Job Description P0A9P0 Confidence 100.00% Date Thu Jan 5 11:10:52 GMT 2012 Rank 25 Aligned Residues 462 % Identity 24% Template c3dgzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase 2; PDBTitle: crystal structure of mouse mitochondrial thioredoxin reductase, c-2 terminal 3-residue truncation Resolution 2.25 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		E	I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	.	.	.	.	.	.	.	.	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	S	F	D	L	L	V	I	G	G	G	S	G	G	L	A	C	A	K	E	A	A	Q	L	G	K	K	V	A	V	A	D	Y	V	E	P	S	P	R	G	T	K	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	A	L	L	G	G	M	I	R	D	A	H	H	Y	G	W	E
Template Known Secondary structure													S													T	T													T	T	S					T	T							S																							T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		76	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure							.																																																								.
Query SS confidence							.																																																								.
Query Sequence		F	G	E	P	K	.	T	D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	.	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P
Query Conservation							.																																																								.
Alig confidence							.																																																								.
Template Conservation
Template Sequence		V	A	Q	P	V	Q	H	N	W	K	T	M	A	E	A	V	Q	N	H	V	K	S	L	N	W	G	H	R	V	Q	L	Q	D	R	K	V	K	Y	F	N	I	K	A	S	F	V	D	E	H	T	V	R	G	V	D	K	G	G	K	A	T	L	L	S	A	E	H	I	V	I	A	T	G	G	R	P	R	Y	P	T
Template Known Secondary structure				S	S																														T	T											S	S	S	S							T	T	S																						S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	H	E	D	P	R	I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	K	G	A	L	E	Y	G	I	T	S	D	D	I	F	W	L	K	E	S	P	G	K	T	L	V	V	G	A	S	Y	V	A	L	E	C	A	G	F	L	T	G	I	G	L	D	T	T	V	M	M	R	S	I	P	L	R	G	F	D	Q	Q	M	S	S	L	V	T	E	H	M	E	S	H	G	T	Q	F	L
Template Known Secondary structure		S		B	T						B						T	T		S	S				S							S													T	T								S	S		S	S	T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																	.	.																																														.
Query SS confidence																	.	.																																														.
Query Sequence		L	E	T	K	V	T	A	V	E	A	K	E	D	G	I	.	.	Y	V	T	M	E	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	.	F	I	R	V	D	K	Q	L	R	T	N	V	P	H	I	F	A
Query Conservation																	.	.																																														.
Alig confidence																	.	.																																														.
Template Conservation
Template Sequence		K	G	C	V	P	S	H	I	K	K	L	P	T	N	Q	L	Q	V	T	W	E	D	H	A	S	G	K	E	D	T	G	T	F	D	T	V	L	W	A	I	G	R	V	P	E	T	R	T	L	N	L	E	K	A	G	I	S	T	N	P	K	N	Q	K	I	I	V	D	A	Q	E	A	T	S	V	P	H	I	Y	A
Template Known Secondary structure			T										T	T	S									T	T	T	T								S						S					S		G	G	G	T	G	G	G	G	T			B		S	S	S			B				T	T	S	B		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		311	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure									.																							.																																																	.
Query SS confidence									.																							.																																																	.
Query Sequence		I	G	D	I	V	G	Q	.	P	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I	A	G	K	K	.	H	Y	F	D	P	K	V	I	P	S	I	A	Y	T	E	P	E	V	A	W	V	G	L	T	E	K	E	A	K	E	K	G	I	S	Y	E	T	A	T	F	P	W	A	A	S	G	R	A	.
Query Conservation									.																							.																																																	.
Alig confidence									.																							.																																																	.
Template Conservation
Template Sequence		I	G	D	V	A	E	G	R	P	E	L	T	P	T	A	I	K	A	G	K	L	L	A	Q	R	L	F	G	K	S	S	T	L	M	D	Y	S	N	V	P	T	T	V	F	T	P	L	E	Y	G	C	V	G	L	S	E	E	E	A	V	A	L	H	G	Q	E	H	V	E	V	Y	H	A	Y	Y	K	P	L	E	F
Template Known Secondary structure			G	G	G	B	T	T																					S									T	T							S	S	S																		G	G	G
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
				388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.	.																			.
Query SS confidence		.	.																			.
Query Sequence		.	.	I	A	S	D	C	A	D	G	M	T	K	L	I	F	D	K	E	S	.	H	R	V	I	G	G	A	I	V	G	T	N	G	G	E	L	L	G	E	I	G	L	A	I	E	M	G	C	D	A	E	D	I	A	L	T	I	H	A	H	P	T	L	H	E	S	V	G	L	A	A	E	V	F	E	G	S	I	T
Query Conservation		.	.																			.
Alig confidence		.	.																			.
Template Conservation
Template Sequence		T	V	A	D	R	D	A	S	Q	C	Y	I	K	M	V	C	M	R	E	P	P	Q	L	V	L	G	L	H	F	L	G	P	N	A	G	E	V	T	Q	G	F	A	L	G	I	K	C	G	A	S	Y	A	Q	V	M	Q	T	V	G	I	H	P	T	C	S	E	E	V	V	K	L	H	I	S	K	R	S	G	L	E
Template Known Secondary structure				T	T				T	T									S	S	T	T		B									T	T														T	T		B						T	S				S	S		S	T					T					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		465
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		484