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Job DescriptionP0A9P0
Confidence99.96%DateThu Jan 5 11:10:52 GMT 2012
Rank81Aligned Residues301
% Identity18%Templatec3d8xB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of saccharomyces cerevisiae nadph dependent2 thioredoxin reductase 1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  IKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDID
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Template Sequence  VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAA. GGQLTTTTEIENFPGFPDGLT. . . . . . . . . . . . . . . . .
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STT




SSGGG

T.T
GGGG
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   85....90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  KIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHED. . . . .
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Template Sequence  . . . . . GSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKG
Template Known Secondary structure  .....TT




SSSSTT
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TTBTTT
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   64.....70.........80.........90.........100.........110.........120.........130........
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  PRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVT
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Template Sequence  ISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL. . . . RASTIMQKRAEKNEKIEILYNTVAL
Template Known Secondary structure  S
TTSGGGTTS
SSTTTSS
SSSS
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S

TT
S
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   139140.........150.........160.........170.........180......... 190.........200.........210....
 
   240........ .250.........260.........270.........280.........290....... ..300.........310......
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Query Sequence  AVEAKEDGI. . YVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRV. DKQLRTNVPHIFAIGDIVG
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Template Sequence  EAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIV. . . AGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQD
Template Known Secondary structure  SSSSTTTT
S
S


GGG...TTTS
B
TTS
B


TTS


SSTT
GGGG
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   215....220.........230.........240.........250....... ..260.........270.........280.........290.
 
   317.. 320.........330.....
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Query Sequence  QPM. LAHKGVHEGHVAAEVI
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Template Sequence  SKYRQAITSAGSGCMAALDA
Template Known Secondary structure  SS


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   292.......300.........310.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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