Job Description P0A9P0 Confidence 99.96% Date Thu Jan 5 11:10:52 GMT 2012 Rank 84 Aligned Residues 301 % Identity 19% Template c3ab1B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: crystal structure of ferredoxin nadp+ oxidoreductase Resolution 2.39 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T	D	I	D	K	I
Query Conservation
Alig confidence																																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	T	I	I	G	G	G	P	T	G	I	F	A	A	F	Q	C	G	M	N	N	I	S	C	R	I	I	E	S	M	P	Q	L	G	G	Q	L	A	A	.	.	L	Y	P	E	K	H	I	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	F	P	E	V	P	A	I	D	L
Template Known Secondary structure										S													T	T								S	S	S	S	S							.	.			T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	B	S	S
Template Predicted Secondary structure																																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.																	.	.	.	.	.	70	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		V	E	S	L	W	A	Q	A	E	R	.	.	.	.	.	.	.	.	Y	N	P	D	V	V	L	N	E	T	V	T	K	Y	T	K	L	D	D	G	T	F	E	T	R	T	N	T	G	N	V	Y	R	S	R	A	V	L	I	A	A	G	L	G	A	F	E	P	R	K	L	P	Q	L	G	N	I	D	H	L	T	G
Template Known Secondary structure										G	G	.	.	.	.	.	.	.	.	G							S										T	T	S							T	T	S													T	T	S								G	G	G				T	T	T	B	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	V	Y	Y	A	V	K	S	V	E	D	F	K	G	K	R	V	V	I	V	G	G	G	D	S	A	L	D	W	T	V	G	L	I	K	N	A	A	S	V	T	L	V	H	R	G	H	E	F	Q	G	H	G	K	T	A	H	E	V	E	R	A	R	A	N	G	T	I	D	V	Y	L	E	T	E	V	A	S	I
Template Known Secondary structure		T	T			S	S		S		G	G	G	G	T	T								S	S										T	T	T	T	S	S							S	S	S	S		S	S		S												T	T	S	S					T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.
Predicted Secondary structure									.																																																																				.	.	.
Query SS confidence									.																																																																				.	.	.
Query Sequence		E	A	K	E	D	G	I	.	Y	V	T	M	E	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	Q	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V	.	.	.	G	Q
Query Conservation									.																																																																				.	.	.
Alig confidence									.																																								.	.	.																										.	.	.
Template Conservation																																																	.	.	.
Template Sequence		E	E	S	N	G	V	L	T	R	V	H	L	R	S	S	D	G	S	K	W	T	V	E	A	D	R	L	L	I	L	I	G	F	K	S	N	L	G	P	L	A	R	W	D	L	E	L	.	.	.	Y	E	N	A	L	V	V	D	S	H	M	K	T	S	V	D	G	L	Y	A	A	G	D	I	A	Y	Y	P	G	K
Template Known Secondary structure					T	T										S	S	S								S						S											T	S	S	S			.	.	.		T	T						T	T	S	B		S	S	T	T					G	G	G				T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	I	I	Q	T	G	L	S	E	A	T	M	A	V	R	H	S	L
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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