Job Description P0A9P0 Confidence 100.00% Date Thu Jan 5 11:10:52 GMT 2012 Rank 54 Aligned Residues 306 % Identity 20% Template c2zbwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of thioredoxin reductase-like protein from thermus2 thermophilus hb8 Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	E	I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T
Query Conservation
Alig confidence				.	.																																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	.	.	H	T	D	V	L	I	V	G	A	G	P	T	G	L	F	A	G	F	Y	V	G	X	R	G	L	S	F	R	F	V	D	P	L	P	E	P	G	G	Q	L	T	A	.	.	L	Y	P	E	K	Y	I	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	F	P	K	V
Template Known Secondary structure				.	.										S													T	T								S	S	S	S	S							.	.	T		T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T		S	S
Template Predicted Secondary structure				.	.																																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.																	.	.	.	.	60	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		Y	A	K	D	L	V	K	G	L	V	E	Q	V	A	P	F	N	P	V	Y	S	L	G	E	R	A	E	T	L	E	R	E	G	D	L	F	K	V	T	T	S	Q	G	N	A	Y	T	A	.	.	.	.	K	A	V	I	I	A	A	G	V	G	A	F	E	P	R	R	I	G	A	P	G	E	R	E	F	E	G	R
Template Known Secondary structure															G	G	G							S										T	T							T	T	S						.	.	.	.								T	T	S										T	T	T	T	T	T	B	T	T
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		G	V	Y	Y	A	V	K	S	K	A	E	F	Q	G	K	R	V	L	I	V	G	G	G	D	S	A	V	D	W	A	L	N	L	L	D	T	A	R	R	I	T	L	I	H	R	R	P	Q	F	R	A	H	E	A	.	S	V	K	E	L	X	K	A	H	E	E	G	R	L	E	V	L	T	P	Y	E	L	R	R	V
Template Known Secondary structure		T			S	S		S		G	G	G	G	T	T								S	S										T	T	T	T	S	S							S	S	S	S			S				.											T	T	S	S				T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																																																																	.	.
Query SS confidence															.																																																																	.	.
Query Sequence		E	A	K	E	D	G	I	Y	V	T	M	E	G	.	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	Q	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V	G	Q	P	.	.
Query Conservation															.																																																																	.	.
Alig confidence															.																																		.	.	.																													.	.
Template Conservation																																																	.	.	.
Template Sequence		E	G	D	E	R	V	R	W	A	V	V	F	H	N	Q	T	Q	E	E	L	A	L	E	V	D	A	V	L	I	L	A	G	Y	I	T	K	L	G	P	L	A	N	W	G	L	A	L	.	.	.	E	K	N	K	I	K	V	D	T	T	X	A	T	S	I	P	G	V	Y	A	C	G	D	I	V	T	Y	P	G	K
Template Known Secondary structure				S	S	S									T	T	T									S													G	G	G	G	G	S					.	.	.		T	T						T	T		B		S	S	T	T					S	T	T				T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
			319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	P	L	I	V	L	G	F	G	E	A	A	I	A	A	N	H	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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