Job Description P0A9P0 Confidence 99.97% Date Thu Jan 5 11:10:52 GMT 2012 Rank 64 Aligned Residues 305 % Identity 18% Template c2vdcI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	E	I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	E	L	G	L	S	V	G	V	I	G	A	G	P	A	G	L	A	A	A	E	E	L	R	A	K	G	Y	E	V	H	V	Y	D	R	Y	D	R	M	G	G	L	L	V	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	G	F	K	L
Template Known Secondary structure			S	S											S														T								S	S	S	S		S	T					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	T	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																												190	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	S	V	V	E	R	R	V	K	L	L	A	D	A	G	V	I	Y	H	P	N	F	E	V	G	R	D	A	S	L	P	E	L	R	R	K	H	V	A	V	L	V	A	T	G	V	Y	K	A	R	D	I	K	A	P	G	S	G	L	G	N	I	V	A	A	L	D	Y	L	T	T	S	N	K	V	S	L	G	D
Template Known Secondary structure																T	T					T	T			B	T	T	T	B							S	S		S														T	T		S			T	T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		T	V	E	A	Y	E	N	G	S	L	N	A	A	G	K	H	V	V	V	L	G	G	G	D	T	A	M	D	C	V	R	T	A	I	R	Q	G	A	T	S	V	K	C	L	Y	.	.	R	R	D	R	K	N	M	P	G	S	Q	R	E	V	A	H	A	E	E	E	G	V	E	F	I	W	Q	A	A	P	E	G	F
Template Known Secondary structure		T		S	S			T	T		S					S							S	S													T	T		S							.	.	S	S		S	T	T		S	S											T	T							S	S	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.																	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query Sequence		E	A	K	E	D	G	I	Y	V	T	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	.	Q	L	R	T	N
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Template Conservation
Template Sequence		T	G	D	T	V	V	T	G	V	R	A	V	R	I	H	L	G	V	A	D	A	T	G	R	Q	T	P	Q	V	I	E	G	S	E	F	T	V	Q	A	D	L	V	I	K	A	L	G	F	E	P	E	D	L	P	N	A	F	D	E	P	E	L	K	V	T	R	W	G	T	L	L	V	D	H	R	T	K	M	T	N
Template Known Secondary structure									T	T														T	T																S						S													S	T	T	S		B		T	T	S	S	B				T	T	T		B		S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	H	I	F	A	I	G	D	I	V	G	Q	P	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	G	V	F	A	A	G	D	I	V	R	G	A	S	L	V	V	W	A	I	R	D	G	R	D	A	A	E	G	I
Template Known Secondary structure		S	T	T					G	G	G	G	S	S			S
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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