Job Description P0A9P0 Confidence 99.96% Date Thu Jan 5 11:10:52 GMT 2012 Rank 75 Aligned Residues 298 % Identity 15% Template c2q0lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: helicobacter pylori thioredoxin reductase reduced by sodium dithionite2 in complex with nadp+ Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T	D	I	D	K	I
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	C	A	I	I	G	G	G	P	A	G	L	S	A	G	L	Y	A	T	R	G	G	V	K	N	A	V	L	F	E	K	G	M	P	G	G	Q	I	T	G	S	S	E	I	E	N	Y	P	G	V	K	E	V	V	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S													T	T		S	S						S	S	S	T	T		G	G	G	G		S		B			S	T	T			S		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P	R	I	W	D	S	T
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	D	F	M	Q	P	W	Q	E	Q	C	F	R	F	G	L	K	H	E	M	T	A	V	Q	R	V	S	K	K	D	S	H	F	V	I	L	A	E	D	G	K	T	F	E	A	K	S	V	I	I	A	T	G	G	S	P	K	R	T	G	I	K	G	E	S	E	Y	W	G	K	G	V	S	T	C	A
Template Known Secondary structure		.	.	.	.													T	T	S						S									T	T							T	T	S																						B	T					B	T	T	T			S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A	V	E	A	K	E	D
Query Conservation
Alig confidence																																														.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		T	C	D	G	F	F	Y	K	N	K	E	V	A	V	L	G	G	G	D	T	A	V	E	E	A	I	Y	L	A	N	I	C	K	K	V	Y	L	I	H	R	R	D	G	F	.	.	.	.	R	C	A	P	I	T	L	E	H	A	K	N	N	D	K	I	E	F	L	T	P	Y	V	V	E	E	I	K	G	D	A	S
Template Known Secondary structure					G	G	G	G	T	T	S								S												T	T	S	S							S	S	S	S		.	.	.	.		S										T		T	T					T	T										T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		247	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.
Predicted Secondary structure								.	.																												.	.																																					.
Query SS confidence								.	.																												.	.																																					.
Query Sequence		G	I	Y	V	T	M	.	.	E	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	.	.	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	Q	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V	.	G	Q	P	M	L	A
Query Conservation								.	.																												.	.																																					.
Alig confidence								.	.																												.	.																																					.
Template Conservation
Template Sequence		G	V	S	S	L	S	I	K	N	T	A	T	N	E	K	R	E	L	V	V	P	G	F	F	I	F	V	G	Y	D	V	N	N	A	V	L	K	Q	E	D	N	S	M	L	C	K	C	D	E	Y	G	S	I	V	V	D	F	S	M	K	T	N	V	Q	G	L	F	A	A	G	D	I	R	I	F	A	P	K	Q	V
Template Known Secondary structure											T	T	T									S						S							G	G	G	B		T	T	S		B	S	S		B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		322	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	G	V	H	E	G	H	V	A	A	E	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	C	A	A	S	D	G	A	T	A	A	L	S	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions