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Job DescriptionP0A9P0
Confidence100.00%DateThu Jan 5 11:10:52 GMT 2012
Rank46Aligned Residues378
% Identity20%Templatec2gr2A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30. ........40.........50.........60.........70.........80..
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Query Sequence  IKTQVVVLGAGPAGYSAAFRCADLGLE. . TVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTD
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Template Sequence  LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

SS

ST

S
SS
S

B
SGG...................................
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   6...10.........20.........30.........40.........50
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  IDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRI
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Template Sequence  . . . . LSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPV
Template Known Secondary structure  ....GGT

GGGSB


TTS
S
T

TTTTTTS

S





GGGTT
SS
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   51........60.........70.........80.........90.........100.........110.........120......
 
   163. .....170.........180.........190.........200.........210. ........220.... .....230....
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Query Sequence  WD. . . . . . STDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVI. PAADKDIVKVFTK. RISKKFNLML
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Template Sequence  HTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF
Template Known Secondary structure 

SSTT

TT


STT
SSSSS
TTTS
TT
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  ETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDI
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Template Sequence  ERSVTGSVDG. . . . . . . . VVLLDDGTRIAADMVVVGIGVLANDALAR. . . . AAGLACDDGIFVDAYGRTTCPDVYALGDV
Template Known Secondary structure  T

TT........TTS

S
S


....T

BSSS

TT
B
SSTT
GGG
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   207..210...... ...220.........230.........240..... ....250.........260.........270....
 
   315. ...320.........330.........340. ........350.........360.........370.........380...
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Query Sequence  VG. . . . . . . . . . QPMLAHKGVHEGHVAAEVIAGKKHY. FDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAA
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Template Sequence  TRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGD. . . . . . . . . . . . . . . EE
Template Known Secondary structure  TTTT




TTS






TT
S

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   275....280.........290.........300.........310.........320.........330....... ..
 
   384.....390.........400.........410.........420.........430.........440.........450...
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Query Sequence  SGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVG
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Template Sequence  IVRGEVSLDAPKFTLIEL. . QKGRIVGATCVN. . NARDFAPLRRLLAVGAKP. DRAALADPATDLRKLAA
Template Known Secondary structure  S


SSS

..TTS..
TT


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   340.........350....... ..360......... 370.........380....... ..390.........400....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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