Job Description P0A9P0 Confidence 99.94% Date Thu Jan 5 11:10:52 GMT 2012 Rank 98 Aligned Residues 296 % Identity 18% Template c2a87A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of m. tuberculosis thioredoxin reductase Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	E	I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K	T
Query Conservation
Alig confidence																																												.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	H	P	V	R	D	V	I	V	I	G	S	G	P	A	G	Y	T	A	A	L	Y	A	A	R	A	Q	L	A	P	L	V	F	E	G	T	S	F	G	G	A	.	L	M	T	T	T	D	V	E	N	Y	P	G	F	R	N	G	I	T	G	P	E	L	M	D	E	M	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																												T	T									S	S		S		G	.	G	G	S		S		B			S	T	T		T	T		B										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	.	.	.	H	E
Query Conservation																																																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	Q	A	L	R	F	G	A	D	L	R	M	E	D	V	E	S	V	S	L	H	G	P	L	K	S	V	V	T	A	D	G	Q	T	H	R	A	R	A	V	I	L	A	M	G	A	A	A	R	Y	L	Q	V	P	G	E	Q	E	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T														S	S	S	S						T	T	S																						T					T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	R	I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V
Query Conservation
Alig confidence																																																																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		G	R	G	V	S	S	C	A	T	C	D	G	F	F	F	R	D	Q	D	I	A	V	I	G	G	G	D	S	A	M	E	E	A	T	F	L	T	R	F	A	R	S	V	T	L	V	H	R	R	D	E	F	R	A	S	K	I	M	L	D	R	A	R	N	N	D	.	.	.	.	K	I	R	F	L	T	N	H	T	V
Template Known Secondary structure		T	T	T			S						G	G	G	G	T	T								S	S											T	T	T		S							S	S	S	S		S	S		T	T									T	.	.	.	.	T						S
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																		.																																													.
Query SS confidence																		.																																													.
Query Sequence		T	A	V	E	A	K	E	D	G	I	Y	V	T	M	E	G	.	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	.	K	Q	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V	G
Query Conservation																		.																																													.
Alig confidence																		.																											.	.	.																.
Template Conservation																																													.	.	.
Template Sequence		V	A	V	D	G	D	T	T	V	T	G	L	R	V	R	D	T	N	T	G	A	E	T	T	L	P	V	T	G	V	F	V	A	I	G	H	E	P	R	S	G	L	V	.	.	.	R	E	A	I	D	V	D	P	D	G	Y	V	L	V	Q	G	R	T	T	S	T	S	L	P	G	V	F	A	A	G	D	L	V	D
Template Known Secondary structure							S	S	S										T	T	S								S						S							T	T	T	.	.	.	B	T	T	B		B		T	T	S		B			S	T	T	S	S	B		S	S	T	T					G	G	G	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		317	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		Q	P	.	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		R	T	Y	R	Q	A	V	T	A	A	G	S	G	C	A	A	A	I	D	A
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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