Job Description P0A9P0 Confidence 100.00% Date Thu Jan 5 11:10:52 GMT 2012 Rank 3 Aligned Residues 458 % Identity 42% Template c1zmcG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of human dihydrolipoamide dehydrogenase2 complexed to nad+ Resolution 2.53 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		T	E	I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	.	.	A	L	A	E	H	G	I	V	F	G	E	P	K
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		Q	P	I	D	A	D	V	T	V	I	G	S	G	P	G	G	Y	V	A	A	I	K	A	A	Q	L	G	F	K	T	V	C	I	E	K	N	E	T	L	G	G	T	C	L	N	V	G	C	I	P	S	K	A	L	L	N	N	S	H	Y	Y	H	M	A	H	G	T	D	F	A	S	R	G	I	E	M	S	E	V	R
Template Known Secondary structure														S														T									S	S	S	S	S							S																			S					T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		T	D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	.	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		L	N	L	D	K	M	M	E	Q	K	S	T	A	V	K	A	L	T	G	G	I	A	H	L	F	K	Q	N	K	V	V	H	V	N	G	Y	G	K	I	T	G	K	N	Q	V	T	A	T	K	A	D	G	G	T	Q	V	I	D	T	K	N	I	L	I	A	T	G	S	E	V	T	P	F	P	G	I	T	I	D	E
Template Known Secondary structure																													T	T						S							T	T							T	T	S																						T	T					S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		P	R	I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	.	.	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K
Query Conservation																																																											.	.
Alig confidence																																																											.	.
Template Conservation
Template Sequence		D	T	I	V	S	S	T	G	A	L	S	L	K	K	V	P	E	K	M	V	V	I	G	A	G	V	I	G	V	E	L	G	S	V	W	Q	R	L	G	A	D	V	T	A	V	E	F	L	G	H	V	G	G	V	G	I	D	M	E	I	S	K	N	F	Q	R	I	L	Q	K	Q	G	F	K	F	K	L	N	T	K
Template Known Secondary structure		S	S								T	T		S	S			S								S													T	T								S	S	S	S	S	S		T	T																	T						S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		V	T	A	V	E	A	K	E	D	G	I	Y	V	T	.	.	M	E	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	Q	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		V	T	G	A	T	K	K	S	D	G	K	I	D	V	S	I	E	A	A	S	G	G	K	A	E	V	I	T	C	D	V	L	L	V	C	I	G	R	R	P	F	T	K	N	L	G	L	E	E	L	G	I	E	L	D	P	R	G	R	I	P	V	N	T	R	F	Q	T	K	I	P	N	I	Y	A	I	G	D	V	V
Template Known Secondary structure									T	T	S									T	T	S									S													T	T	S	S					T					T	T	S						T	T		B		S	S	T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	P	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I	A	G	K	K	H	Y	F	D	P	K	V	I	P	S	I	A	Y	T	E	P	E	V	A	W	V	G	L	T	E	K	E	A	K	E	K	G	I	S	Y	E	T	A	T	F	P	W	A	A	S	G	R	A	I	A	S	D	C	A	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	P	M	L	A	H	K	A	E	D	E	G	I	I	C	V	E	G	M	A	G	G	A	V	H	I	D	Y	N	C	V	P	S	V	I	Y	T	H	P	E	V	A	W	V	G	K	S	E	E	Q	L	K	E	E	G	I	E	Y	K	V	G	K	F	P	F	A	A	N	S	R	A	K	T	N	A	D	T	D	G
Template Known Secondary structure		S	S																			T	T							G	G	G							S	S	S																T										G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	K	L	I	F	D	K	E	S	H	R	V	I	G	G	A	I	V	G	T	N	G	G	E	L	L	G	E	I	G	L	A	I	E	M	G	C	D	A	E	D	I	A	L	T	I	H	A	H	P	T	L	H	E	S	V	G	L	A	A	E	V	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	K	I	L	G	Q	K	S	T	D	R	V	L	G	A	H	I	L	G	P	G	A	G	E	M	V	N	E	A	A	L	A	L	E	Y	G	A	S	C	E	D	I	A	R	V	C	H	A	H	P	T	L	S	E	A	F	R	E	A	N	L	A	A	S
Template Known Secondary structure									T	T	T		B									T	T															T		B							S				S	S		T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.