Job Description P0A9P0 Confidence 99.96% Date Thu Jan 5 11:10:52 GMT 2012 Rank 71 Aligned Residues 309 % Identity 17% Template c1vdcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dependent thioredoxin reductase; PDBTitle: structure of nadph dependent thioredoxin reductase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	T	E	I	K	T	Q	V	V	V	L	G	A	G	P	A	G	Y	S	A	A	F	R	C	A	D	L	G	L	E	T	V	I	V	E	R	Y	N	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	V	A	K	V	I	E	E	A	K	A	L	A	E	H	G	I	V	F	G	E	P	K
Query Conservation
Alig confidence						.																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	T	H	.	N	T	R	L	C	I	V	G	S	G	P	A	A	H	T	A	A	I	Y	A	A	R	A	E	L	K	P	L	L	F	E	G	W	M	A	N	D	I	A	P	.	G	G	Q	L	T	T	T	T	D	V	E	N	F	P	G	F	P	E	G	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						.										S													T	T									S	S	B	T	T	B		T	.	T		G	G	G	G		S					S	T	T		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	D	K	I	R	T	W	K	E	K	V	I	N	Q	L	T	G	G	L	A	G	M	A	K	G	R	K	V	K	V	V	N	G	L	G	K	F	T	G	A	N	T	L	E	V	E	G	E	N	G	K	T	V	I	N	F	D	N	A	I	I	A	A	G	S	R	P	I	Q	L	P	F	I	P	H	E	D	P
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	V	E	L	T	D	K	F	R	K	Q	S	E	R	F	G	T	T	I	F	T	E	T	V	T	K	V	D	F	S	S	K	P	F	K	L	F	T	D	S	K	A	I	L	A	D	A	V	I	L	A	I	G	A	V	A	K	R	L	S	F	V	G	S	G	E	V	L	G	G	F	W	N	R	G	I
Template Known Secondary structure		.	.	.	.															T	T														S	S	S	S						S	S																						B	T		S	S	S	S	S			B	T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	W	D	S	T	D	A	L	E	L	K	E	V	P	E	R	L	L	V	M	G	G	G	I	I	G	L	E	M	G	T	V	Y	H	A	L	G	S	Q	I	D	V	V	E	M	F	D	Q	V	I	P	A	A	D	K	D	I	V	K	V	F	T	K	R	I	S	K	K	F	N	L	M	L	E	T	K	V	T	A
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		S	A	C	A	V	C	D	G	A	A	P	I	F	R	N	K	P	L	A	V	I	G	G	G	D	S	A	M	E	E	A	N	F	L	T	K	Y	G	S	K	V	Y	I	I	H	R	R	D	A	F	R	A	S	K	.	.	.	.	I	M	Q	Q	R	A	L	S	N	P	K	I	D	V	I	W	N	S	S	V	V	E
Template Known Secondary structure			S						T	T	S	G	G	G	T	T	S								S											T	T	T	S	S							S	S	S	S			S			.	.	.	.								T		T	T						S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																															.
Query SS confidence															.	.	.	.																																															.
Query Sequence		V	E	A	K	E	D	G	I	Y	V	T	M	E	.	.	.	.	G	K	K	A	P	A	E	P	Q	R	Y	D	A	V	L	V	A	I	G	R	V	P	N	G	K	N	L	D	A	G	K	A	G	V	E	V	D	D	R	G	F	I	R	V	D	K	.	Q	L	R	T	N	V	P	H	I	F	A	I	G	D	I	V
Query Conservation															.	.	.	.																																															.
Alig confidence															.	.	.	.																												.	.	.																	.
Template Conservation																																														.	.	.
Template Sequence		A	Y	G	D	G	E	R	D	V	L	G	G	L	K	V	K	N	V	V	T	G	D	V	S	D	L	K	V	S	G	L	F	F	A	I	G	H	E	P	A	T	K	F	L	.	.	.	D	G	G	V	E	L	D	S	D	G	Y	V	V	T	K	P	G	T	T	Q	T	S	V	P	G	V	F	A	A	G	D	V	Q
Template Known Secondary structure					S	S	S	S	S	S									T	T	T									S						S					S		G	G	G	.	.	.	T	T	S	S		B		T	T	S		B				T	T	S		B		S	S	T	T					G	G	G	G
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		316	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	Q	.	P	M	L	A	H	K	G	V	H	E	G	H	V	A	A	E	V	I
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	K	K	Y	R	Q	A	I	T	A	A	G	T	G	C	M	A	A	L	D	A
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions