Return to main results Retrieve Phyre Job Id

Job DescriptionP39161
Confidence75.20%DateThu Jan 5 11:58:17 GMT 2012
Rank263Aligned Residues36
% Identity36%Templated2htja1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain FaeA-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........
Predicted Secondary structure 











Query SS confidence 



































Query Sequence  PPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGA
Query Conservation 


  


  



  




  
   


    
 
Alig confidence 



































Template Conservation    
 
















  






 




Template Sequence  GKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLR
Template Known Secondary structure 

TS
TS

S
Template Predicted Secondary structure 



Template SS confidence 



































   15....20.........30.........40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions