 |
Job Description | P39161 | Confidence | 80.72% | Date | Thu Jan 5 11:58:17 GMT 2012 |
Rank | 226 | Aligned Residues | 51 |
% Identity | 16% | Template | d2gxba1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Z-DNA binding domain
|
Resolution | 2.25 |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | V | G | A | M | I | R | D | L | I | I | K | T | P | Y | N | P | G | E | R | L | P | P | E | R | E | I | A | E | M | L | D | V | T | R | T | V | V | R | E | A | L | I | M | L | E | I | K | G | L | V | E | V | R | R | G | A |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |
| . | . | . | . | . | . |
|
|   |   |   |
|   | . |   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |
|
|
Template Sequence |   |
Q | R | I | L | K | F | L | E | E | . |
. |
. |
. |
. |
. |
L | G | E | G | K | A | T | . |
T | A | H | D | L | S | G | K | L | G | T | P | K | K | E | I | N | R | V | L | Y | S | L | A | K | K | G | K | L | Q | K | E | A | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
| T | T |
|
| B | . |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
141 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
150 | . | . | . | . | . | . | |
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|