Job Description P39161 Confidence 91.07% Date Thu Jan 5 11:58:17 GMT 2012 Rank 176 Aligned Residues 109 % Identity 17% Template d2g9wa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 1.80

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		M	I	R	D	L	I	I	K	T	P	Y	N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	.	.	.	.	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V	C	N	D
Query Conservation																														.	.	.	.
Alig confidence																			.											.	.	.	.																				.
Template Conservation																			.																																		.
Template Sequence		D	L	E	R	A	V	X	D	H	L	W	S	R	T	E	P	Q	.	T	V	R	Q	V	H	E	A	L	S	A	R	R	D	L	A	Y	T	T	V	X	A	V	L	Q	R	L	A	K	K	N	L	V	.	L	Q	I	R	A	H	R	Y	A	P	V	H	G	R	D	E	L	V	A	G	L	X	V	D	A	L	A	Q
Template Known Secondary structure													T		S	S			.										T	T	T																		T	T	S		.											S	S															T	T
Template Predicted Secondary structure																			.																																		.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	P	F	E	L	L	Q	A	R	Q	L	L	E	S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V	K	M	R	Q	A	L	Q	L	E	E	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	E	D	S	G	S	R	Q	A	A	L	V	H	F	V	E	R	V	G	A	D	E	A	D	A	L	R	R	A	L	A	E	L	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	S	S	S															S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions