Job Description P39161 Confidence 95.91% Date Thu Jan 5 11:58:17 GMT 2012 Rank 50 Aligned Residues 94 % Identity 19% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	.	Q	N	T	D	S	P	D	A	N	V	C	N	D	A	G	P	F	E	L	L	Q	A	R	Q	L	L	E
Query Conservation																																																						.
Alig confidence								.																																.	.													.
Template Conservation								.																																.	.
Template Sequence		N	P	S	S	L	C	.	T	S	D	Y	X	A	E	S	V	N	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	A	G	F	V	Y	V	.	.	N	G	G	A	G	L	L	K	D	L	H	E	I	T	L	L	D	V	Y	H	A	V	N	V	I	G	A	N	I	Q	A	V	L	E	I	I	L	I	Q	A
Template Known Secondary structure		S		G	G	G		.										T	S															T	T	S				.	.							S	S		G	G	G		B
Template Predicted Secondary structure								.																																.	.
Template SS confidence
		23	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	A	X	E	E	V	L	R	N	I	T	X	G	Q	L	F	E
Template Known Secondary structure											T		B
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions