Job Description P39161 Confidence 65.07% Date Thu Jan 5 11:58:17 GMT 2012 Rank 312 Aligned Residues 89 % Identity 12% Template d1yg2a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.20

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V	C	N	D	A	G	P	F	E	L	L	Q	A	R	Q	L	L	E	S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V
Query Conservation
Alig confidence																						.																											.
Template Conservation																						.																											.
Template Sequence		K	A	S	H	Q	Q	V	Y	R	E	L	N	K	M	G	E	Q	G	L	V	.	T	C	V	L	E	V	Y	S	I	T	Q	A	G	R	S	A	L	G	E	W	F	D	Q	P	T	A	.	H	P	T	V	R	D	E	F	S	A	K	L	M	A	C	S	V	Q	S	A	E	P	Y	R	L	Q	L	A	E	L	V	E
Template Known Secondary structure																		T	T	S		.																							S				.														G	G	G	T	S
Template Predicted Secondary structure																						.																											.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		124	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	R	Q	A	L	Q	L	E	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	R	K	L	V	A	H	Y	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions