Job Description P39161 Confidence 78.62% Date Thu Jan 5 11:58:17 GMT 2012 Rank 244 Aligned Residues 64 % Identity 11% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	.	.	.	.	.	.	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V	C	N	D	A	G	P	F	E	L	L
Query Conservation																																					.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	Y	R	I	T	P	E	G	I	K	Y	Y	K	Q	K	C	E	E	W	E	L	T	K	K	V	I	N	K	F	V
Template Known Secondary structure						T	T	S																		T	T	S																																									T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions