Return to main results Retrieve Phyre Job Id

Job DescriptionP39161
Confidence95.23%DateThu Jan 5 11:58:17 GMT 2012
Rank71Aligned Residues63
% Identity21%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60...... ...70.........80.........90.......
Predicted Secondary structure 







....







Query SS confidence 































. . . .






























Query Sequence  PEREIAEMLDVTRTVVREALIMLEIKGLVEVR. . . . RGAGIYVLDNSGSQNTDSPDANVCNDAGPFE
Query Conservation 

  


  



  




  
   


   .... 
 
  
                        
Alig confidence 































....






























Template Conservation 
  


    
    

  
  
   


 
      
   

      
 
  
   
 
 
  
 
Template Sequence  RVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVLKEFKSSILGEIERIE
Template Known Secondary structure 
T

TTSSSS

Template Predicted Secondary structure 


















Template SS confidence 


































































   35....40.........50.........60.........70.........80.........90.........100.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions