Return to main results Retrieve Phyre Job Id

Job DescriptionP39161
Confidence43.36%DateThu Jan 5 11:58:17 GMT 2012
Rank481Aligned Residues49
% Identity20%Templated1fipa_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like FIS-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20....... ..30.........40.........50.......
Predicted Secondary structure 








..











Query SS confidence 






















. .





























Query Sequence  TSAQRPYQEVGAMIRDLIIKTPY. . NPGERLPPEREIAEMLDVTRTVVREALIML
Query Conservation         
 
   
   
  
 
.. 

  



  


  



  




  
Alig confidence 






















..


....






















Template Conservation            
   
   
  

    
....
   

  




 

  



 
Template Sequence  QDVNDLYELVLAEVEQALLDMVMQYTRG. . . . NQTRAALMMGINRGTLRKKLKKY
Template Known Secondary structure 


S
TTT....
TS
T
Template Predicted Secondary structure 



....



Template SS confidence 






















































   45....50.........60.........70.. .......80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions