Job Description P39161 Confidence 96.73% Date Thu Jan 5 11:58:17 GMT 2012 Rank 41 Aligned Residues 61 % Identity 16% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.							.	.
Query SS confidence																																										.	.	.	.							.	.
Query Sequence		N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	.	.	.	.	G	A	G	I	Y	V	.	.	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V
Query Conservation																																										.	.	.	.							.	.
Alig confidence								.																																		.	.	.	.							.	.
Template Conservation								.
Template Sequence		E	P	D	R	W	I	.	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I	Q	K	I	V
Template Known Secondary structure		S	T	T			B	.									T	T																T	T	S									T	T	S
Template Predicted Secondary structure								.
Template SS confidence
		35	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions