Job Description P39161 Confidence 95.55% Date Thu Jan 5 11:58:17 GMT 2012 Rank 58 Aligned Residues 91 % Identity 15% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	.	.	.	.	.	.	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V	C	N	D	A	G	P	F	E	L	L	Q	A	R
Query Conservation																																												.	.	.	.	.	.
Alig confidence							.																																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	E	E	T	.	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N	I	N	R	L	V	A	N	L	E	K	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	T	D	L	G	K	K	V	X	V	T	C	S	R	T	G	I	N	F	X	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G		.										T	S															T	T	S							S	S		T	T																										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	E	S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V	K	M	R	Q	A	L	Q	L	E	E	R	E	L	A	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	D	V	F	H	E	F	T	K	D	E	L	E	T	L	W	S	L	L	K	K	X	Y	R	F	N	G	E
Template Known Secondary structure		.	.	.	.	.	.	.	.				T	T	T																		T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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