Return to main results Retrieve Phyre Job Id

Job DescriptionP39161
Confidence96.69%DateThu Jan 5 11:58:17 GMT 2012
Rank42Aligned Residues75
% Identity17%Templatec3lwfD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60......... 70.........80.
Predicted Secondary structure 

























.




Query SS confidence 































































.











Query Sequence  SAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGA. GIYVLDNSGSQN
Query Conservation        
 
   
   
  
 
 

  



  


  



  




  
   


    
 .
  
        
Alig confidence 



























.


































.











Template Conservation     


    


  
  

        .
   

    
    
 


  
  



 
 

  


 


    
Template Sequence  QGXKITTKGRYGLTITLELAKRIGDGPI. SLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKI
Template Known Secondary structure 
SS


TTTS

B.
T

TTS
STT

S
TTT
Template Predicted Secondary structure 












.















Template SS confidence 












































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions