Job Description P39161 Confidence 95.01% Date Thu Jan 5 11:58:17 GMT 2012 Rank 81 Aligned Residues 68 % Identity 16% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	R	D	L	I	I	K	T	P	Y	N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V	C	N
Query Conservation
Alig confidence													.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		Q	I	L	C	X	L	H	N	Q	E	L	.	.	.	.	.	.	.	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K	E	A	Q	T	V	Y	Y	T	L	K	S	E	E	V	K	A	X	I	K	L	L	H	S	L
Template Known Secondary structure							T	T	T	S			.	.	.	.	.	.	.										T																T	T	S							T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions