Job Description P39161 Confidence 100.00% Date Thu Jan 5 11:58:17 GMT 2012 Rank 1 Aligned Residues 203 % Identity 21% Template c3ihuA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of dna binding protein (yp_298823.1) from ralstonia2 eutropha jmp134 at 1.92 a resolution Resolution 1.92 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Y	Q	E	V	G	A	M	I	R	D	L	I	I	K	T	P	Y	N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		S	A	S	D	T	V	F	F	G	I	X	S	G	L	E	L	G	T	F	V	P	G	Q	R	L	V	.	E	T	D	L	V	A	H	F	G	V	G	R	N	S	V	R	E	A	L	Q	R	L	A	A	E	G	I	V	D	L	Q	R	H	R	G	A	V	I	R	R	L	S	L	Q	E	T	L	D	V	L	D	V	A
Template Known Secondary structure																		T	S	S		T	T					.									T																T	T	S					S	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	N	D	A	G	P	F	E	L	L	Q	A	R	Q	L	L	E	S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V	K	M	R	Q	A	L	Q	L	E	E	R	E	L	A	S	S	A	P	G	S	S	E	S	G	D	M	Q	F	H	L	A	I	A	E	A	T	H	N	S	M	L	V	E	L	F
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	A	R	A	A	T	R	G	S	G	N	Q	P	Q	V	Q	A	L	R	A	S	V	Q	A	L	V	A	A	E	K	A	Q	D	G	E	T	F	S	N	A	R	R	H	F	Y	R	T	L	L	E	X	G	D	N	R	E	L	R	R	L	F
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	T	T																					T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.														.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	S	W	Q	W	R	E	N	N	P	M	W	I	Q	L	H	S	H	L	D	D	S	L	Y	R	K	E	W	L	G	D	H	K	Q	I	L	A	A	L	I	K	K	D	A	R	A	A	K	L	A	M	W	Q	H	L	E	N	V	K	Q	R	L	L	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		P	T	I	H	X	P	I	V	H	A	Q	H	R	.	.	.	.	.	.	.	.	L	A	S	L	R	Q	X	R	L	D	D	Y	R	R	I	A	T	A	V	L	A	G	E	P	D	A	A	E	A	A	G	A	A	H	V	K	N	V	R	G	A	I	L	D
Template Known Secondary structure													T	T	.	.	.	.	.	.	.	.	G	G	G	G																		T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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