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Job DescriptionP39161
Confidence100.00%DateThu Jan 5 11:58:17 GMT 2012
Rank2Aligned Residues204
% Identity22%Templatec3fmsA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYVLDNSGSQNTDSPDANV
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Template Sequence  VRTKVYNLLKEXILNHELKLGEKLN. VRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRI
Template Known Secondary structure  TTSS
TT
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TSTTT



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Query Sequence  CNDAGPFELLQARQLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATHNSMLVELFR
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Template Sequence  XXE. . . . . . . . . . . . . . VFCLENYFDKIAGS. . EELLEIKGEIDDVAASAAREIFDDSDERLHKLFIRASGNELIISLYE
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Query Sequence  QSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDD
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Template Sequence  KIWDRIDLVRH. . . . . . . . . LNERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLYTYE
Template Known Secondary structure  T.........T


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   152.......160.. .......170.........180.........190.........200.........210..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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