Job Description P39161 Confidence 100.00% Date Thu Jan 5 11:58:17 GMT 2012 Rank 2 Aligned Residues 204 % Identity 22% Template c3fmsA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	Q	E	V	G	A	M	I	R	D	L	I	I	K	T	P	Y	N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N	V
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	L	N	.	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D	V	D	E	K	F	I	R	E	T	I	E	T	R	I
Template Known Secondary structure																T	T	S	S		T	T		B			.									T																	T	S					T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	D	A	G	P	F	E	L	L	Q	A	R	Q	L	L	E	S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V	K	M	R	Q	A	L	Q	L	E	E	R	E	L	A	S	S	A	P	G	S	S	E	S	G	D	M	Q	F	H	L	A	I	A	E	A	T	H	N	S	M	L	V	E	L	F	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		X	X	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	C	L	E	N	Y	F	D	K	I	A	G	S	.	.	E	E	L	L	E	I	K	G	E	I	D	D	V	A	A	S	A	A	R	E	I	F	D	D	S	D	E	R	L	H	K	L	F	I	R	A	S	G	N	E	L	I	I	S	L	Y	E
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.							S						T		.	.																																				T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		88	.	90															.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	W	Q	W	R	E	N	N	P	M	W	I	Q	L	H	S	H	L	D	D	S	L	Y	R	K	E	W	L	G	D	H	K	Q	I	L	A	A	L	I	K	K	D	A	R	A	A	K	L	A	M	W	Q	H	L	E	N	V	K	Q	R	L	L	E	F	S	N	V	D	D
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		K	I	W	D	R	I	D	L	V	R	H	.	.	.	.	.	.	.	.	.	L	N	E	R	Y	V	V	S	N	R	E	H	K	E	L	I	E	R	I	I	S	G	D	K	E	G	A	I	E	K	L	K	E	H	L	K	N	V	E	A	E	T	I	K	N	L	Y	T	Y	E
Template Known Secondary structure			T										.	.	.	.	.	.	.	.	.	T																				T	T																								G	G	G	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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