 |
Job Description | P39161 | Confidence | 92.63% | Date | Thu Jan 5 11:58:17 GMT 2012 |
Rank | 156 | Aligned Residues | 37 |
% Identity | 11% | Template | c3dkwB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:dnr protein; |
PDBTitle: crystal structure of dnr from pseudomonas aeruginosa.
|
Resolution | 3.60 Å |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | P | P | E | R | E | I | A | E | M | L | D | V | T | R | T | V | V | R | E | A | L | I | M | L | E | I | K | G | L | V | E | V | R | R | G | A |
Query Conservation |   |
  |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
| . |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
P | V | . |
A | K | Q | L | V | A | G | H | L | S | I | Q | P | E | T | F | S | R | I | M | H | R | L | G | D | E | G | I | I | H | L | D | G | R | E |
Template Known Secondary structure |   |
|
| . |
| T | T |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| S | S | S | S | S |
Template Predicted Secondary structure |   |
 |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|