Job Description P39161 Confidence 98.24% Date Thu Jan 5 11:58:17 GMT 2012 Rank 26 Aligned Residues 115 % Identity 15% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Y	Q	E	V	G	A	M	I	R	D	L	I	I	K	T	P	Y	N	P	G	E	R	L	P	P	E	R	E	I	A	E	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	I	K	G	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S	G	S	Q	N	T	D	S	P	D	A	N
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		D	T	T	E	M	Y	L	R	T	I	Y	D	L	E	E	E	G	V	T	P	.	.	.	.	.	.	L	R	A	R	I	A	E	R	L	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	D	G	L	L	R	V	A	G	D	R	H	L	E	L	T	E	K	G	R	A	L	A	I	A	V	M	R	K	H
Template Known Secondary structure		S															T	T				.	.	.	.	.	.									T	T																T	T	S					T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	N	D	A	G	P	F	E	L	L	Q	A	R	Q	L	L	E	S	N	I	A	E	F	A	A	L	Q	A	T	R	E	D	I	V	K	M	R	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	A	E	R	L	L	V	D	V	I	G	L	P	W	E	E	V	H	A	E	A	C	R	W	E	H	V	M	S	E	D	V	E	R	R	L	V	K	V	L
Template Known Secondary structure											T	T															T	T	T													T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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