Job Description P39161 Confidence 50.78% Date Thu Jan 5 11:58:17 GMT 2012 Rank 422 Aligned Residues 49 % Identity 20% Template c2hwvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. Resolution 1.90 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																		.	.	.	.				.	.	.	.
Query SS confidence																.	.	.	.	.																		.	.	.	.				.	.	.	.
Query Sequence		N	P	G	E	R	L	P	P	E	R	E	I	A	E	.	.	.	.	.	M	L	D	V	T	R	T	V	V	R	E	A	L	I	M	L	E	.	.	.	.	I	K	G	.	.	.	.	L	V	E	V	R	R	G	A	G	I	Y	V	L	D	N	S
Query Conservation																.	.	.	.	.																		.	.	.	.				.	.	.	.
Alig confidence								.								.	.	.	.	.																		.	.	.	.				.	.	.	.
Template Conservation								.
Template Sequence		H	I	G	Q	V	M	.	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	V	R	R	L	R	E	K	I	E	D	S	P	S	H	P	T	Y	L	V	T	R	R	G	V	G	Y	Y	L	R	N	P	E
Template Known Secondary structure		T	T	T			B	.										T		G	G	G	T	T																		S	S	T	T	S		S	S					T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		171	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions