Return to main results Retrieve Phyre Job Id

Job DescriptionP06965
Confidence65.96%DateWed Jan 25 15:20:12 GMT 2012
Rank94Aligned Residues28
% Identity36%Templatec2vz4A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30 .........
Predicted Secondary structure 




..





Query SS confidence 


















. .








Query Sequence  SKTKLAQAAGIRLASLYSW. . KGDLVPEGR
Query Conservation      

  



  

 

..

  

  
Alig confidence 


















..








Template Conservation 

 


   


  


 

  


    
Template Sequence  SVGQVAGFAGVTVRTLHHYDDIGLLVPSER
Template Known Secondary structure 
T

TSS

S
Template Predicted Secondary structure 











Template SS confidence 





























   4.....10.........20.........30...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions