 |
| Job Description | P06965 | | Confidence | 59.98% | Date | Wed Jan 25 15:20:12 GMT 2012 |
| Rank | 103 | Aligned Residues | 28 |
| % Identity | 29% | Template | c2jmlA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:dna binding domain/transcriptional regulator; |
PDBTitle: solution structure of the n-terminal domain of cara repressor
|
| Resolution | UNK |
|
| | |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
. | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|  | | | | | | | |
|
|
| | | | | | |
| . | . |
|
|
|
|
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | K | T | K | L | A | Q | A | A | G | I | R | L | A | S | L | Y | S | W | . |
. |
K | G | D | L | V | P | E | G | R |
| Query Conservation | |
| | | |
|
| | |
|
|
|
| | |
|
| |
|
| . | . |
|
| | |
|
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
|
| | | |
|
|
| | |
|
|
| |
|
| | | | |
| | |
| | |
| Template Sequence | |
R | I | R | T | I | A | R | M | T | G | I | R | E | A | T | L | R | A | W | E | R | R | Y | G | F | P | R | P | L | R |
| Template Known Secondary structure | |
 | | | | | | | T | T | S | T | T | | | | | | | | | | | T |
|
| S |
|
| B | S |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
| | | | | | | | | | |
|
|
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
